Data Analysis and Clustering | For the second method, dissimilarity was represented by one minus the absolute value of the Spearman correlation of each protein with every other protein. |
Embedding and Cluster Analysis | For the first, exclusive cluster analysis, we focused on PNCPs and proteins whose phosphor-ylation pattern was statistically most similar determined by both Euclidean distance and Spearman correlation (Figs 1 and S6). |
Embedding and Cluster Analysis | This suggests that statistical relationships independently defined by Euclidean distance or Spearman correlation are equally valid. |
Embedding and Cluster Analysis | In this graph, edges represent positive (yellow) or negative (blue) correlation, filtered to show only edges among proteins that clustered together and have a Spearman correlation coefficient greater than the absolute value of 0.5. |
Supporting Information | This graph is similar to Fig 2 except that edges represent Spearman correlation 2 absolute value of 0.5; positive correlations are yellow; negative, blue. |
Supporting Information | Edges represent Spearman correlation 2 absolute value of 0.5, with positive correlation represented as yellow, negative correlation, blue, filtered to show only co-clustered phosphorylation sites. |
Confirmation of node degree/directionality relationship in a computational model of human brain networks | Fig 4A and 4C clearly demonstrate a negative correlation between node degree and dPLI (Spearman correlation coefficient = - 0.61, p< 0.01) and positive correlation between node degree and amplitude of oscillators ( Spearman correlation coefficient = 0.92, p<0.01) at coupling strength 8 = 3. |
Confirmation of node degree/directionality relationship in human EEG networks during conscious and unconscious states | The strong negative correlation observed during the conscious state (Spearman correlation coefficient of -O.76 (p<0.01)) disappears during the unconscious state ( Spearman correlation coefficient of -0.04 (p<0.01)). |
Confirmation of node degree/directionality relationship in human EEG networks during conscious and unconscious states | However, the correlation between node degree and amplitude for the EEG network differs from the models (nonsignificant Spearman correlation coefficient of 0.266 (p = 0.1) for the conscious state). |
Human EEG network analysis | The spearman correlation coefficient was used for evaluating the correlations among node degree, amplitude and dPLI of the 64 channels (“corr.m” in Matlab). |
Methods). | While for simulated neurons with the same excitatory input strength, the stimulus synchronization limit of synchronized neurons decreased as the I/E ratio increased (P<0.001, Spearman correlation coefficient), we did not observe a statistically significant trend between the stimulus synchronization limit and I/ E ratio in mixed response neurons (P>0.05, Spearman correlation coefficient). |
Model parameters underlying rate and temporal representations | Comparing synchronized neurons with a fixed IE delay of 5 ms, we observed a highly significant correlation (r = 0.99, P<3.1x10'87, Spearman Correlation , Fig. |
Model parameters underlying rate and temporal representations | We observed a statistically significant correlation (r = 0.87, P< 1.5 X 10'”, Spearman Correlation , Fig. |