Index of papers in PLOS Comp. Biol. that mention
  • growth conditions
Timo R. Maarleveld, Meike T. Wortel, Brett G. Olivier, Bas Teusink, Frank J. Bruggeman
A real life example: Escherichia coli growing on glucose
For these growth conditions , general CoPE-FBA results for both the model with and without reversible-reaction splitting are shown in Table 1.
A real life example: Escherichia coli growing on glucose
With splitting we found for each growth condition many more vertices (up to 120 X 106).
A real life example: Escherichia coli growing on glucose
Without this constraint, all vertices in both the aerobic and anaerobic growth condition are instances of their corresponding EFMs (not shown).
Characterization of the optimal solution space: Illustration with a toy model
an anaerobic growth condition ) effectively removes a reaction from the system.
growth conditions is mentioned in 15 sentences in this paper.
Topics mentioned in this paper:
Thomas W. Spiesser, Clemens Kühn, Marcus Krantz, Edda Klipp
Author Summary
In our model, a growth condition specific cell size emerges, as has been found in experiments.
Discussion
Yet, simply regulating G2 length in response to growth conditions does not seem to be the end of the story.
mCLB localization is required to equilibrate S-Gz-M duration between generations
Both model versions show adaptation of S-GZ-M duration to growth conditions (Fig 3).
mCLB localization reduces noise at mitotic entry to stabilise cell size
Model and data could only be reconciled when we adapted S-GZ-M duration to growth conditions .
mCLB localization reduces noise at mitotic entry to stabilise cell size
Thus, we hypothesised that, for a robust setting of average cell size and variability within the culture, S-GZ-M duration must show some form of adaptation to growth conditions .
growth conditions is mentioned in 5 sentences in this paper.
Topics mentioned in this paper:
Andy Phaiboun, Yiming Zhang, Boryung Park, Minsu Kim
Introduction
Under favorable growth conditions , microorganisms can grow rapidly.
Introduction
For example, E. coli cells can grow as fast as ~ 20 min per doubling under ideal growth conditions .
Strain, media, and growth condition
Strain, media, and growth condition
growth conditions is mentioned in 3 sentences in this paper.
Topics mentioned in this paper: