Abstract | In an extensive simulation study , we show that NEMix improves learning of pathway structures over classical NEMs significantly in the presence of hidden pathway stimulation. |
Application to pathogen infection experiments | Like in the simulation study above, we compared the NEMix model to the NEM and the sc-NEM approach. |
Application to pathogen infection experiments | Like for the simulation study , we derived the cell population effects for the NEM from Wilcoxon tests, comparing the knockdown experiment to the control. |
Application to pathogen infection experiments | Like in the simulation study , p0 was initialized by drawing randomly from a uniform distribution. |
Simulation study | Simulation study |
Simulation study | To test our model, we performed a large simulation study . |
Supporting Information | To assess the edge recovery performance for larger NEMiX models, we ran a reduced simulation study . |
Author Summary | To begin to answer these questions, we conducted analytical and simulation studies examining the propagation of spike correlation in feedback neural circuits. |
Introduction | Several simulation studies further revealed that neurons acquire receptive field [17—19] or spike patterns [20] through STDP by introducing lateral inhibition; yet, those studies were limited to simplified cases for which a large population of independent neurons was suggested to be sufficient [5,21,22]. |
Model | Previous simulation studies showed lateral inhibition has critical effects on excitatory STDP learning [17—19]; however, it has not yet been well studied how a secondary correlation generated through the lateral circuits influences STDP at feedforward connections, and it is still largely unknown how lateral inhibition functions with various stimuli in different neural circuits. |
dev Ma Ma d: g ZLanfv’ VEGA? Z qquv’p — NaWZMa WYZL“ Wig", vi Z qquV/p v,=1 p v’=1 P | Therefore, both analytical and simulation studies indicate that lateral inhibition should be strong, fast and sharp to detect higher correlation structure. |
Cross-validation | This approach was used to compute the covariance matrix estimates and their true loss in the simulation study (Fig. |
Simulation | The covariance matrices were then subjected to the respective regularizations to produce the ground truth matrices for the simulation studies (Fig. |
an | This simulation study demonstrated that cross-validated evaluation of regularized estimators of the covariance matrices of population activity can discriminate between structures of dependencies in the population. |
Abstract | Our simulation studies further illustrate the elaborate spatio-temporal regulation of DVL, which, depending on its concentration and localization, may either act as direct inducer of the transient ROS/B-catenin signal or as amplifier during continuous auto-/ parcrine WNT/B-catenin signaling. |
Endogenous ROS signaling as potential trigger for ,B-catenin signaling | Our simulation studies confirm that the presented model of combined redox and raft-dependent wnt signaling provides a sustained eXplanation to our experimental data. |
Nuclear ,B-catenin dynamics during early differentiation in human neural progenitor cells | To explore the signaling mechanisms of both, the continuous activation pattern in untreated and in particular the early immediate response in raft-deficient cells, we perform a number of simulation studies based on a validated computational model of WNT signaling we will present in the following. |
A simulation study of tests for the correlation of CPI-supported paths and carriage | A simulation study of tests for the correlation of CPI-supported paths and carriage |
Author Summary | A simulation study was first conducted to choose a test statistic for the association of CPI paths with transmission, showing that CPI path length from transmitter to incident case was the most powerful. |
Statistical analysis | To first study the characteristics of the three approaches and choose the most powerful, we used a simulation study based on a Susceptible—Colonized—Susceptible transmission model on the CPI network. |