Abstract | The CSNAP method is freely available and can be accessed from the CSNAP web server (http://services.mbi.ucla.edu/CSNAP/). |
Discussion | To further extend the applicability of CSNAP for compound target prediction in a broad array of disciplines, we have made the CSNAP algorithm freely accessible as a CSNAP web server (http://services.mbi.ucla.edu/CSNAP/). |
Discussion | The web server allows users to analyze up to 300 ligands in parallel, where each ligand can be processed in less than a minute on average (813 Fig). |
Introduction | The CSNAP method is freely available and can be accessed from the CSNAP web server (http://services.mbi.ucla.edu/CSNAP/). |
Software | The CSNAP program is freely accessible from the CSNAP web server (http://services.mbi.ucla.edu/CSNAP/). |
Acknowledgments | Mark also administers the web server that hosts our Webidemics software. |
Online interface and software architecture | It is an interface to a ‘back-end’ program that runs on a central web server ; this is written in C, and is the component that actually performs the model simulations presented in this paper. |
Online interface and software architecture | Parameters and results are passed between the front-and back-ends Via a Perl CGI (“Common Gateway Interface”) wrapper program hosted on the web server . |
Discussion | To this end, we have developed a Web server that allows everyone to submit their own sets of compounds and check the predictions against pre-built networks for the human and Mycobacterium proteomes. |
nAnnoLyze Web site implementation | We have implemented a Web server where an end user can retrieve all precalculated predictions for the DrugBank and human protein as well as submit its own set of compounds. |
nAnnoLyze Web site implementation | All the structural data and all the predictions can be downloaded from the nAnnoLyze Web server at http:// www.marciuslab.org/services/nAnnoLyze. |