Index of papers in PLOS Comp. Biol. that mention
  • model simulations
Tae J. Lee, Jeffrey Wong, Sena Bae, Anna Jisu Lee, Allison Lopatkin, Fan Yuan, Lingchong You
A power-law summarizes uptake dependence on host receptors
Zipper model simulations reveal that uptake probability as a function of receptor behaves in this characteristic fashion according to P 2 RB / (KDeff + RB) (Fig 2D).
Log 1IKM
Zipper model simulations were performed at MOI (500) and a power-law of the form P = RB/KDeff was fit to scaled output.
Supporting Information
Zipper model simulations .
Supporting Information
Zipper model simulations were performed and the uptake was calculated for M01 (500).
Supporting Information
(A) For each parameter, the zipper model simulates several perturbations over two orders of magnitude.
model simulations is mentioned in 5 sentences in this paper.
Topics mentioned in this paper:
Ka Wai Lin, Angela Liao, Amina A. Qutub
Parameter fitting
Fig 4A shows the model simulations compared to the literature in Vitro data, to which the model was fit, that monitored the IGFBP2 concentration as a function of time under two external concentrations of IGFI (0 nM and 100 nM) in the system [74].
Parameter fitting
For the case with 0 nM external IGFI, the model simulations that best fitted the in Vitro data was found to be internal IGFI concentration levels of 92.5 nM of IGFI.
Parameter fitting
Fig 3B shows the model simulations compared to literature in Vitro data that monitored HIFloc as a function of oxygen [71].
model simulations is mentioned in 3 sentences in this paper.
Topics mentioned in this paper:
Loes C. J. van Dam, Marc O. Ernst
Bayesian learning model
Predictions for the influence of the number of training pairs on the learning rates were made using a fixed ratio between ayo and a; for the model simulations .
Learning rates
To compare these results to the Mixture-of-Kalman-Filters Model, we reran the model simulations for each participant using the trial-sequence from the point at which each participant started to learn.
Model comparison
However, as mentioned above, model simulations themselves were performed using the trial sequence across all blocks for each individual participant.
model simulations is mentioned in 3 sentences in this paper.
Topics mentioned in this paper: