Index of papers in PLOS Comp. Biol. that mention
  • growth factor
Fiete Haack, Heiko Lemcke, Roland Ewald, Tareck Rharass, Adelinde M. Uhrmacher
A comprehensive model of WNT/,B-catenin signaling
Differentiation of ReNcell VM197 cells is induced solely by growth factor removal and proceeds without any additional external stimulation.
A comprehensive model of WNT/,B-catenin signaling
This cell line differentiates into neurons and glial cells within 72 hours after growth factor removal, which might explain the faster time scale of our model compared to the Lee model.
A comprehensive model of WNT/,B-catenin signaling
It is the combination of these two WNT stimuli, that allows the cell to first generate an immediate response to the perturbation (removal of growth factor ) and in the following to keep the activation on a constant, but moderately incremented level (cf.
Conclusion and Outlook
In response to growth factor removal, a transient increase of the intracellular ROS level activates DVL in a redox-dependent manner.
Endogenous ROS signaling as potential trigger for ,B-catenin signaling
Thus in contrast to the previous model configuration we replaced the initial amount of WNT molecules with a onetime release of ROS molecules (nRos = 10000) in response to growth factor removal.
Nuclear ,B-catenin dynamics during early differentiation in human neural progenitor cells
Within three days after growth factor removal, ReNcell VM197 cells differentiate into neurons, astrocytes, and oligodendrocytes without any additional exogenous stimulation.
Nuclear ,B-catenin dynamics during early differentiation in human neural progenitor cells
Accordingly proliferating ReNcell VM197 cells were used as reference (Oh), whereas all following time points were measured after initiating the differentiation by growth factor removal.
Wet lab
Cells were kept in proliferative state by applying 10 ng/mL basic fibroblast growth factor (bFGF, Invitrogen) and 20 ng/mL epidermal growth factor (EGF, Sigma-Aldrich, Steinheim, Germany).
transcription signal.
Upon growth factor removal ReNcell VM197 cells differentiate into neurons and glial cells within a few days and without any additional external stimulation.
transcription signal.
However further evidence was provided in our previous study on ReNcell VM197 cells, as an early increase of mitochondrial ROS metabolism after growth factor removal was found to modulate DVL-mediated WNT/fi-catenin pathway and neurogenesis [21].
growth factor is mentioned in 12 sentences in this paper.
Topics mentioned in this paper:
Lorenza A. D’Alessandro, Regina Samaga, Tim Maiwald, Seong-Hwan Rho, Sandra Bonefas, Andreas Raue, Nao Iwamoto, Alexandra Kienast, Katharina Waldow, Rene Meyer, Marcel Schilling, Jens Timmer, Steffen Klamt, Ursula Klingmüller
Abstract
Here, we report a novel hybrid mathematical modeling strategy to systematically unravel hepatocyte growth factor (HGF) stimulated phosphoinosi-tide-3-kinase (PI3K) and mitogen activated protein kinase (MAPK) signaling, which critically contribute to liver regeneration.
Author Summary
We combine interaction graph and dynamic modeling with quantitative experimental data to study the hepatocyte growth factor induced signaling network in primary mouse hepatocytes.
Discussion
Examples include that of periodic calcium spikes after growth factor or hormone stimulation [54] and the MAPK system, where positive and negative feedback loops allow the system to switch between monostable and bistable regimes and, therefore, to flexibly adapt the response to different stimuli [55].
Introduction
An important factor that contributes to liver regeneration and has been implicated in the context of resistance to targeted tumor therapy is hepatocyte growth factor (HGF).
growth factor is mentioned in 4 sentences in this paper.
Topics mentioned in this paper:
Ka Wai Lin, Angela Liao, Amina A. Qutub
Development of a computational model
Insulin-like growth factor binding proteins (IGFBPs), which have a high affinity for IGFs, control IGF bioavailability.
Insulin signaling interactions in glioblastoma
Bound complex of Insulin-like Growth Factor 1 and Insulin-like Growth Factor Binding Protein 2 (IGFI-IGFBP2)complex complex
Introduction
Insulin-like growth factor 1 (IGFI) and insu-lin-like growth factor 1 receptor (IGFIR) are an integral part of normal fetal and postnatal growth of the brain [19].
growth factor is mentioned in 3 sentences in this paper.
Topics mentioned in this paper:
Stuart Aitken, Shigeyuki Magi, Ahmad M. N. Alhendi, Masayoshi Itoh, Hideya Kawaji, Timo Lassmann, Carsten O. Daub, Erik Arner, Piero Carninci, Alistair R. R. Forrest, Yoshihide Hayashizaki, Levon M. Khachigian, Mariko Okada-Hatakeyama, Colin A. Semple , the FANTOM Consortium
Introduction
The activation of ErbB receptors by epidermal growth factor (EGF) or heregulin (HRG) in the MCF7 breast cancer cell line exemplifies the impact of such transient or sustained signalling on cell fate [3, 4].
Results
They are normally growth-quiescent in the normal adult vessels, but are activated by injury, or exposure to growth factors (including FGF2) and pro-inflamma-tory cytokines (including IL1b).
The early peak signature is enriched for lEGs and signalling pathways
Pathways associated with the early peak signature included the transforming growth factor (TGF) beta signalling pathway, and the platelet derived growth factor (PDGF) signalling pathway, which play critical roles in cellular proliferation and development [24] and shares the downstream targets with the ErbB receptor signalling pathway, the receptors for EGF and HRG and all those belong to the members of receptor tyrosine kinases (RTK) family.
growth factor is mentioned in 3 sentences in this paper.
Topics mentioned in this paper: